Welcome

Learn about Kernel, software for engineering biology.

Overview

Kernel is software for genetic design and streamlining biological engineering workflows. It combines sequence design tools, team collaboration features, and workflow automation to accelerate the development of biotechnologies.

Core Capabilities

Genetic Design Tools

• Design genetic constructs using an intuitive, parts-based approach

• View designs in multiple formats: linear sequence, circular map, and interactive schematic

• Access integrated tools including codon optimization, biosecurity sequence analysis, and genetic simulation

• Leverage AI-assisted design support with Kernel-AI

Collaborative Workspaces

• Create team workspaces where members can collaborate on projects

• Manage construct designs, genetic parts, and notebooks in repositories with granular permissions

• Share constructs, parts, and protocols securely within and across teams

• Access comprehensive public collections:

  • Asimov's curated genetic parts

  • Uniprot Swiss-Prot collection

  • Addgene plasmid repository

Automated Workflows

• Generate expression vectors automatically with the configurable genetic compiler

• Import sequences with automatic part annotation mapping

• Validate designs with integrated design rule checking

• Track samples and experiments with the integrated inventory system

Documentation & Knowledge Management

• Document experiments in electronic lab notebooks (ELNs)

• Create and share standardized protocols

• Link documentation, data, and images directly to sequence designs

• Search across all workspace content

Getting Started

Ready to begin? Check out our Quick Start Guide to create your first workspace and start designing.

Need help? Contact us at [email protected]